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Pull requests: nf-core/modules

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Pull requests list

Added new module oarfish size/xl
#12638 opened Aug 8, 2026 by khersameesh24 Contributor Loading…
3 tasks
1
Set containerOptions for gatkspark in module
#12637 opened Aug 7, 2026 by FriederikeHanssen Contributor Loading…
17 tasks
1
Update to topic qualimap
#12625 opened Aug 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic qcat
#12623 opened Aug 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic pychopper
#12620 opened Aug 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic pureclip
#12619 opened Aug 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic proteinortho
#12618 opened Aug 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
1
Update to topic proovframe
#12615 opened Aug 7, 2026 by LouisLeNezet Contributor Loading…
17 tasks
2
@LouisLeNezet
Update to topic president
#12614 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Map Ribo-TISH's colon-qualified ORF types on their location
#12613 opened Aug 6, 2026 by FelixKrueger Contributor Loading…
2
Update to topic preseq
#12612 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic portcullis
#12611 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic porechop/*
#12610 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
2
@LouisLeNezet
Update to topic polypolish
#12609 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic pneumocat
#12608 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update to topic pmdtools
#12606 opened Aug 6, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Update ensemblvep modules (vep, filtervep, download) to 116.1
#12604 opened Aug 6, 2026 by ramprasadn Contributor • Draft
17 tasks
Provide .fna support for pbmm2/align
#12602 opened Aug 6, 2026 by stvdsomp Loading…
6 tasks done
3
fix probe-set inclusion assertion size/m
#12601 opened Aug 6, 2026 by fmalmeida Contributor Loading…
1
@fmalmeida
2
Update to topic pints
#12590 opened Aug 5, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
Add module: pcangsd/inbreeding
#12587 opened Aug 5, 2026 by ASendellPrice Contributor Loading…
12 of 14 tasks
1
@ASendellPrice
Remove varianble's 'def' from samtool sort 'output_file'
#12582 opened Aug 4, 2026 by bagnacan Contributor Loading…
4 tasks done
Fix 103 dead documentation links in module meta.yml
#12581 opened Aug 4, 2026 by karpovantonme Loading…
3 tasks done
Update to topic phyloflash Do not merge yet
#12577 opened Aug 4, 2026 by LouisLeNezet Contributor • Draft
17 tasks
1
@LouisLeNezet
1
Update to topic phispy
#12576 opened Aug 4, 2026 by LouisLeNezet Contributor Loading…
17 tasks
1
@LouisLeNezet
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