Merge branch 'master' into add-module-oarfish

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Graphite / mergeability_check

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check-files

confirm-pass-gpu

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nf-test-changes

x64 | conda | 1

x64 | docker | 1

x64 | singularity | 1

x64 | conda | 2

x64 | docker | 2

x64 | singularity | 2

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x64 | singularity | 5

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x64 | singularity | 6

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x64 | singularity | 7

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x64 | singularity | 8

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x64 | singularity | 10

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x64 | singularity | 11

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x64 | singularity | 12

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x64 | singularity | 13

x64 | conda | 14

x64 | docker | 14

x64 | singularity | 14

confirm-pass-nf-test

labeler on: pull_request

Label the PR size

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check-files

confirm-pass-nf-test

Run Linting on: pull_request

pre-commit

nf-core-changes

nf-core lint modules (oarfish/alignmentmode)

nf-core lint modules (oarfish/alignmentprojectionmode)

nf-core lint modules (oarfish/readmode)

nf-core lint modules (oarfish/readprojectionmode)

nf-core lint subworkflows

confirm-pass-lint

Run GPU nf-tests on: pull_request

nf-test-changes

GPU Test | g4dn.xlarge | ${{ matrix.profile }} | ${{ matrix.shard }}

GPU Test | g4dn.2xlarge | ${{ matrix.profile }} | ${{ matrix.shard }}

confirm-pass-gpu

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