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Updating workflows/microbiome/metagenomic-genes-catalogue from 1.3 to 1.4 #1333

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8 changes: 8 additions & 0 deletions workflows/microbiome/metagenomic-genes-catalogue/CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,5 +1,13 @@
# Changelog

## [1.4] - 2026-08-10

### Automatic update
- `toolshed.g2.bx.psu.edu/repos/iuc/amrfinderplus/amrfinderplus/3.12.8+galaxy0` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/amrfinderplus/amrfinderplus/4.2.7+galaxy0`
- `toolshed.g2.bx.psu.edu/repos/iuc/abricate/abricate/1.4.0` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/abricate/abricate/1.4.0+galaxy1`
- `toolshed.g2.bx.psu.edu/repos/iuc/coverm_contig/coverm_contig/0.8.0+galaxy0` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/coverm_contig/coverm_contig/0.8.0+galaxy1`
- `toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2`

## [1.3] - 2026-07-16

### Changed
Expand Down
84 changes: 37 additions & 47 deletions workflows/microbiome/metagenomic-genes-catalogue/metagenomic-genes-catalogue.ga
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Original file line number Diff line number Diff line change
Expand Up @@ -53,13 +53,13 @@
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Expand All @@ -78,13 +78,13 @@
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Expand Down Expand Up @@ -650,12 +650,7 @@
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Expand Down Expand Up @@ -1002,7 +997,7 @@
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Expand Down Expand Up @@ -1053,16 +1048,16 @@
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Expand All @@ -1076,7 +1071,7 @@
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Expand Down Expand Up @@ -1116,16 +1111,16 @@
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Expand Down Expand Up @@ -1431,7 +1426,7 @@
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Expand Down Expand Up @@ -1532,7 +1527,7 @@
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Expand Down Expand Up @@ -2465,14 +2460,14 @@
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Expand Down Expand Up @@ -2569,12 +2564,7 @@
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Expand Down Expand Up @@ -2610,7 +2600,7 @@
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Expand Down Expand Up @@ -2666,14 +2656,14 @@
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Expand Down Expand Up @@ -2826,7 +2816,7 @@
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Expand Down Expand Up @@ -2872,7 +2862,7 @@
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Expand Down Expand Up @@ -3404,7 +3394,7 @@
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Expand Down Expand Up @@ -3439,16 +3429,16 @@
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Expand Down Expand Up @@ -3594,7 +3584,7 @@
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Expand All @@ -3615,7 +3605,7 @@
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Expand Down Expand Up @@ -3679,16 +3669,16 @@
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Expand All @@ -3708,7 +3698,7 @@
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