Add observed ion mobility and CCS to chromatogram extraction - #4301

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bspratt wants to merge 57 commits into

Skyline/work/20260504_im_error

Commits on May 4, 2026

Added intensity-weighted IM-error accumulation in chrom extraction

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d83da9e
Added IM/CCS error array support to ChromCollector and TimeIntensities

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9dab2d0
Wired IM error through chrom collector and time series transforms

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1740ebb
Bumped cache format to v20 with per-time-point IM error storage

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9e55871
Added per-peak IM and CCS error fields to ChromPeak and TransitionChromInfo

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470ff66
Surfaced IM/CCS error percent in Document Grid

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288a9ff

Commits on May 8, 2026

Commits on Jun 3, 2026

just adding a @ to a non-localized string for quiet inspection
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294ee43
Encoded per-time-point observed ion mobility as scaled integers in cache

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c5ea4ed
Added tiered windowed idotp guard for observed ion mobility

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29975f8
Removed the IM strategy-comparison diagnostic dump

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03a270a
Visualized observed ion mobility in the Full Scan graph

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a080538
Fixed PauseAndContinueForm truncating multi-paragraph messages

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5e1d5d3
Cleaned up incidental ReSharper inspections

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dadd981
Regenerated report column reference docs for the new IM columns

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b1764e4

Commits on Jun 11, 2026

Merge remote-tracking branch 'origin/master' into Skyline/work/20260504_im_error
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7e7ae66

Commits on Jun 13, 2026

Read observed ion mobility at the peak apex-of-valid

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3754a39
Aligned Full Scan CCS-error target with the Document Grid

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07f4ea1
Merge remote-tracking branch 'origin/master' into Skyline/work/20260504_im_error
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35447af

Commits on Jun 14, 2026

Excluded FAIMS and SONAR from observed ion mobility tracking

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c1acdb2
Merge remote-tracking branch 'origin/master' into Skyline/work/20260504_im_error
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82e833c
Merge branch 'master' into Skyline/work/20260504_im_error
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e0395aa
Addressed Copilot review feedback on PR #4301

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845f207
Addressed Copilot review round 2 on PR #4301

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1b5b732

Commits on Jun 15, 2026

Commits on Jun 16, 2026

clean up a code inspection error
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225b265

Commits on Jun 25, 2026

Addressed Copilot review feedback on PR #4301

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be50e7c

Commits on Jun 29, 2026

Added a Full Scan observed-IM tooltip screenshot seam for the Small Molecule Libraries tutorial

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fbc1b26

Commits on Jun 30, 2026

Show observed ion mobility / CCS percent error to 2 decimals

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21f719d
Merge observed-IM tooltip into the IM-filtering tutorial shot; reword tooltip header

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516d8b1

Commits on Jul 1, 2026

Refine Full Scan observed-IM tooltip labels and mobilogram width

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001dae7

Commits on Jul 4, 2026

Merge branch 'master' into Skyline/work/20260504_im_error
bspratt
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cf22eee

Commits on Jul 7, 2026

Merge branch 'master' into Skyline/work/20260504_im_error
bspratt
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f1c0c64

Commits on Jul 10, 2026

Merge branch 'master' into Skyline/work/20260504_im_error
bspratt
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48db259

Commits on Jul 11, 2026

Commits on Jul 14, 2026

Commits on Jul 20, 2026

Merge branch 'master' into Skyline/work/20260504_im_error
bspratt
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f885a5c

Commits on Jul 24, 2026

Reworked observed ion mobility to a single per-ion value

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30ca73b
Added MS2-only fallback and a test for the per-ion observed IM

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3c1f836
Regenerated report-column help for the per-precursor observed IM/CCS columns

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c9ec7c9
Made the per-ion observed IM aggregation unit-testable and covered the MS2 fallback

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f155e71

Commits on Jul 28, 2026

Fixed observed-IM review findings: null-IM bias, small-molecule + fallback gaps

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cdfd166

Commits on Jul 29, 2026

Commits on Aug 11, 2026

Merge branch 'master' into Skyline/work/20260504_im_error
bspratt
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b2a2c79

Commits on Aug 26, 2026

Merge branch 'master' into Skyline/work/20260504_im_error
bspratt
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08251bb