genetic-data

An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies

A package, and script, to perform imaging transcriptomics on a neuroimaging scan.

An Open Source Web Application for Genetic Data (SNPs) Data Crawling

A novel self-supervised feature extraction method using omics data is proposed which improves classification in most of the classifiers.

Developing guidelines for adding sequence data to OBIS

This is a pipeline for quality control and cleanup for genetic data. It can be tailored to fit whole genome, exome sequencing or SNP array

Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England (peer-reviewed)

🧬 Convert FoundationOne genomic reports to cBioPortal OncoPrinter format — visualize mutations, CNVs, and fusions

Learn breeding principles by hands on!

Reopsitory with raw data and code to analyse the relationship between environmental conditions and clonality in Lepidium draba.

Local-first 23andMe and DTC DNA raw data to VCF 4.2 converter with PySide6 GUI, GRCh37/GRCh38 detection, and dbSNP/FASTA REF lookup

biotec-line organization profile for local-first bioinformatics, VCF, genotype conversion, and research-use-only genetic variant tools

Project to analyze for potential clinical trends and create survival analysis plots based on specific genes for a type of liver cancer.

Attempt on building a high-performance compression tool for genetic data

AI-powered personalized medicine from your DNA — CPIC-grounded pharmacogenomics from raw 23andMe / AncestryDNA / PDF data.

Detection of epistasis patterns using Stochastic Mutliple Markov Blanket-Ant Colony Optimization (SMMB-ACO) method and Variable Neighbor Search (VNS)

Implementation of Context Binning and Model Clustering for Compression of Genetic Data