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r-gensa: Added 1.1.15. Improved compilation compatability with R and GCC #6198

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Merged
cmelone merged 4 commits into from
Aug 28, 2026
Merged

r-gensa: Added 1.1.15. Improved compilation compatability with R and GCC #6198

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4e52301
r-gensa: Added 1.1.15. Improved compilation compatability with R and GCC
emwjacobson Aug 23, 2026
cf24aa7
Swapped conflict for depends
emwjacobson Aug 25, 2026
1deb89c
Revert "Swapped conflict for depends"
emwjacobson Aug 26, 2026
65bb9fc
trigger CI pipeline
emwjacobson Aug 28, 2026
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17 changes: 17 additions & 0 deletions repos/spack_repo/builtin/packages/r_gensa/package.py
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Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@ class RGensa(RPackage):

cran = "GenSA"

version("1.1.15", sha256="68970dc3b463986b5b7130acbd42a5ae5a85835d004fb54f81b3ef5c2fccf925")
version("1.1.14", sha256="66e455bb0e66d3c04af84d9dddc9b89f40b4cf9fe9ad1cf0714bcf30aa1b6837")
version("1.1.8", sha256="375e87541eb6b098584afccab361dc28ff09d03cf1d062ff970208e294eca216")
version("1.1.7", sha256="9d99d3d0a4b7770c3c3a6de44206811272d78ab94481713a8c369f7d6ae7b80f")
Expand All @@ -23,3 +24,19 @@ class RGensa(RPackage):
depends_on("cxx", type="build") # generated

depends_on("r@2.12.0:", type=("build", "run"))
# Rf_allocLang() was only added in r@4.4.1.
depends_on("r@4.4.1:", type=("build", "run"), when="@1.1.15:")

# Versions <= 1.1.14 use SET_TYPEOF, which was removed from Rinternals.h in r@4.6.0
conflicts("r@4.6:", when="@:1.1.14")

def patch(self):
if self.spec.satisfies("@:1.1.8 ^r@4.4.0:"):
# Utils.h relied on transitively including R_ext/BLAS.h from R_ext/Applic.h
# r@4.4.0 removed this, so patch in BLAS.h header to allow for compilation
with working_dir("src"):
filter_file(
r"#include <R_ext/Applic.h>",
"#include <R_ext/Applic.h>\n#include <R_ext/BLAS.h>",
"Utils.h",
)
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