initial commit to support archaeal genome annotations - #452

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xvazquezc wants to merge 6 commits into

oschwengers:mainfrom

Commits on Aug 28, 2026

initial commit to support annotations for archaeal genomes/MAGs: separated arch dbs, rRNA profiles, Rfam, tRNAs (with introns), ori detection with Ori-Finder-Arch, custom sORF start codons, Pyl su…
xvazquezc
committed
9d511ed

Commits on Sep 1, 2026

rename organism archaea to domain archaea
xvazquezc
committed
6bfe04e
let the script know its own location
xvazquezc
committed
a11eb26
missing taxa var
xvazquezc
committed
342dfcd
better error message if Ori-Finder-Arch fails
xvazquezc
committed
0193f22

Commits on Sep 3, 2026

add checkpoints in case db building fails so it can resume
xvazquezc
committed
576298e