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ENH: Add optional warpkit MEDIC support for multi-echo BOLD distortion correction - #3645

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DVSneuro wants to merge 16 commits into
nipreps:masterfrom
DVSneuro:warpkit-medic
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ENH: Add optional warpkit MEDIC support for multi-echo BOLD distortion correction#3645
DVSneuro wants to merge 16 commits into
nipreps:masterfrom
DVSneuro:warpkit-medic

FIX: Avoid assert in MEDIC echo-order check

a57f163
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Codecov / codecov/project succeeded May 20, 2026 in 0s

74.84% (+0.42%) compared to 69ca63c

View this Pull Request on Codecov

74.84% (+0.42%) compared to 69ca63c

Details

Codecov Report

❌ Patch coverage is 78.24427% with 57 lines in your changes missing coverage. Please review.
✅ Project coverage is 74.84%. Comparing base (69ca63c) to head (a57f163).

Files with missing lines Patch % Lines
fmriprep/interfaces/warpkit.py 40.32% 37 Missing ⚠️
fmriprep/workflows/bold/fit.py 82.22% 5 Missing and 3 partials ⚠️
fmriprep/interfaces/resampling.py 20.00% 2 Missing and 2 partials ⚠️
fmriprep/workflows/base.py 66.66% 2 Missing and 1 partial ⚠️
fmriprep/cli/parser.py 75.00% 1 Missing and 1 partial ⚠️
fmriprep/utils/bids.py 81.81% 1 Missing and 1 partial ⚠️
fmriprep/interfaces/maths.py 94.73% 0 Missing and 1 partial ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##           master    #3645      +/-   ##
==========================================
+ Coverage   74.41%   74.84%   +0.42%     
==========================================
  Files          62       64       +2     
  Lines        4987     5235     +248     
  Branches      637      676      +39     
==========================================
+ Hits         3711     3918     +207     
- Misses       1142     1172      +30     
- Partials      134      145      +11     

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