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Merged
vinisalazar merged 1 commit into from
Aug 5, 2026
+9 −9
Merged

Point database.csv at nf-core/test-datasets #2199

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18 changes: 9 additions & 9 deletions database.csv
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Original file line number Diff line number Diff line change
@@ -1,14 +1,14 @@
tool,db_name,db_entity,db_params,db_path
humann_v3,demo_v3,humann_nucleotide,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/humann/v3/chocophlan_nfDEMO.tar.gz
humann_v3,demo_v3,humann_protein,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/humann/v3/uniref_nfDEMO.tar.gz
humann_v3,demo_v3,humann_nucleotide,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/humann/v3/chocophlan_nfDEMO.tar.gz
humann_v3,demo_v3,humann_protein,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/humann/v3/uniref_nfDEMO.tar.gz
humann_v3,demo_v3,humann_metaphlan,,https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/delete_me/metaphlan4_database.tar.gz
humann_v3,demo_v3,humann_utility,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/humann/v3/utility_nfDEMO.tar.gz
fmhfunprofiler,fmhfunprofiler1000,,11 1000,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/fmhfunprofiler/KOs_sketched_scaled_1000_demo.sig.zip
rgi,4.0.1,,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/rgi/broadstreet-v4.0.1.tar.bz2
humann_v4,demo_v4,humann_nucleotide,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/humann/v4/chocophlan_nfDEMO.tar.gz
humann_v4,demo_v4,humann_protein,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/humann/v4/uniref_nfDEMO.tar.gz
humann_v4,demo_v4,humann_utility,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/humann/v4/utility_nfDEMO.tar.gz
humann_v4,demo_v4,humann_metaphlan,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/metaphlan/metaphlan_demo_for_humann4.tar.gz
mifaser,GS-24-all,,,https://github.com/nickp60/test-datasets/raw/refs/heads/funcprofiler/data/database/mifaser/GS-24-all.tar.gz
fmhfunprofiler,fmhfunprofiler1000,,11 1000,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/fmhfunprofiler/KOs_sketched_scaled_1000_demo.sig.zip
rgi,4.0.1,,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/rgi/broadstreet-v4.0.1.tar.bz2
humann_v4,demo_v4,humann_nucleotide,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/humann/v4/chocophlan_nfDEMO.tar.gz
humann_v4,demo_v4,humann_protein,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/humann/v4/uniref_nfDEMO.tar.gz
humann_v4,demo_v4,humann_utility,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/humann/v4/utility_nfDEMO.tar.gz
humann_v4,demo_v4,humann_metaphlan,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/metaphlan/metaphlan_demo_for_humann4.tar.gz
mifaser,GS-24-all,,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/mifaser/GS-24-all.tar.gz
eggnogmapper,demo,eggnogmapper_data_dir,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/eggnog-mapper/eggnog_data_dir.tar.gz
diamond,bfragilis,,,https://raw.githubusercontent.com/nf-core/test-datasets/funcprofiler/data/database/diamond/bfragilis_proteome.dmnd