Release 3.10.0 - #2257

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FriederikeHanssen wants to merge 29 commits into

Commits on Jun 30, 2026

Prepare dev (3.9.1dev) (#2225)
maxulysse
authored
99766d9

Commits on Jul 6, 2026

Add varlociraptor/filterfdr, update varlociraptor (#2208)
famosab
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e219d7b

Commits on Jul 8, 2026

Update EnsemblVEP to 116.0 (#2229)
maxulysse
authored
bd02bf2

Commits on Jul 13, 2026

Important! Template update for nf-core/tools v4.0.2 (#2178)

nf-core-bot
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maxulysse
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2d44030

Commits on Jul 14, 2026

Commits on Jul 15, 2026

Skip nf-schema path validation for annotation_cache and igenomes_base (#2184)

authored
41a8e70
Update bcftools to 1.23.1 (#2210)

authored
a0d5fd3

Commits on Jul 16, 2026

Commits on Jul 17, 2026

Replace `.set {}` with plain assignment for strict-syntax readiness (#2234)

FriederikeHanssen
and
claude
authored
e3d53c5

Commits on Jul 21, 2026

Commits on Jul 22, 2026

Commits on Jul 23, 2026

chore(modules): migrate variant-calling modules to versions topic channel (#2240)

FriederikeHanssen
and
claude
authored
c8c2348

Commits on Jul 27, 2026

Commits on Jul 29, 2026

Commits on Jul 31, 2026

Template update for nf-core/tools v4.0.3 (#2248)

FriederikeHanssen
and
claude
authored
bd3e9bc

Commits on Aug 4, 2026

Important! Template update for nf-core/tools v4.1.0 (#2255)

FriederikeHanssen
and
claude
authored
c3cbfab
Merge branch 'master' into dev
FriederikeHanssen
authored
335a0a9

Commits on Aug 6, 2026

Apply suggestions from code review

authored
d4f97d4

Commits on Aug 7, 2026

Revert to self-hosted runners for nf-test workflows (#2259)

FriederikeHanssen
and
claude
authored
3e7c732
Prepare release 3.10.0 (Aktse) (#2258)

FriederikeHanssen
and
claude
authored
0804b9a

Commits on Aug 10, 2026

Address review feedback on the 3.10.0 release PR (#2260)
FriederikeHanssen
authored
8679fe6