Fastq scripts upgrade - #84

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RPINerd wants to merge 9 commits into

jorvis:masterfrom

Commits on Oct 19, 2024

Direct python3 translation of script, with updates to more gracefully handle arguments
RPINerd
committed
3cf7ccb
Update script for fully py3, refactor, clean, organize
RPINerd
committed
4464174
Update formatting, reorg code
RPINerd
committed
368e87b
Upgrade, refactor, sytax
RPINerd
committed
5f8d54c
Large reorg, update sytax, cleanup py2 legacy
RPINerd
committed
f354ade
Update syntax for py3, unify arg parse command, Black/flake8 best practices
RPINerd
committed
7ac1f6d

Commits on Nov 16, 2024

Complete refactor using cases and binary flags to cleanup argument handling
RPINerd
committed
ffc8a22

Commits on Nov 19, 2024

Refactor, flake8/Black formatting and best practices, some upgrades for newer python3 conventions
RPINerd
committed
8ee4aaa

Commits on Dec 11, 2024

Merge branch 'jorvis:master' into master
RPINerd
authored
8dda486