Adding: Samtools coverage, Clair3 and Kraken tools extract kraken reads and Updating: Fastp - #768

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EngyNasr:addingandUpdatingToolsPathoGFAIR

Commits on Jun 19, 2024

adding missing tools which are on European server but not on the main org server, needed for Foodborne workflow PathoGFAIR to be publically avaiable on the org server
EngyNasr
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updating fastp
EngyNasr
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