Issues

• extracted PDB structure have broken peptide bonds

  deeptime-ml/deeptime#315 · Filter by author anamika2501 opened on Mar 23, 2026
  1

• Issue faced when using Maximumlikelihood msm

  deeptime-ml/deeptime#309 · Filter by author GSINGH006 opened on Mar 20, 2025
  3

• Dealing with issues related to Active set

  deeptime-ml/deeptime#304 · Filter by author GSINGH006 opened on Feb 3, 2025
  4

• Extracting pdb structures

  deeptime-ml/deeptime#298 · Filter by author GSINGH006 opened on Aug 5, 2024
  3

• Example/tutorial for dealing with MD trajectories

  deeptime-ml/deeptime#287 · Filter by author pojeda opened on Jan 25, 2024
  1

• Which version of VAMPNets is there?

  deeptime-ml/deeptime#282 · Filter by author palominohernandez opened on Sep 17, 2023
  1

• Units

  enhancement
  deeptime-ml/deeptime#235 · Filter by author clonker opened on Apr 27, 2022

• Chapman-Kolmogorov test for Koopman models

  enhancement
  deeptime-ml/deeptime#203 · Filter by author clonker opened on Feb 7, 2022

• Docs: Add k3d-jupyter support and transform some of the animations with it

  documentation
  deeptime-ml/deeptime#180 · Filter by author clonker opened on Dec 17, 2021

• serialization

  long term
  deeptime-ml/deeptime#48 · Filter by author clonker opened on Feb 14, 2020
  1

• Chunking and streaming

  long term
  deeptime-ml/deeptime#13 · Filter by author brookehus opened on Jul 25, 2019