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Guidelines authors - #71

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guidelines-authors
Jul 7, 2026
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Guidelines authors#71
pneuvial merged 4 commits into
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guidelines-authors

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@pneuvial pneuvial commented Jul 1, 2026

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I've updated the guidelines to authors in order to match the synopsis of the future video.

I've also tried to simplify a bit.

Comment thread site/guidelines-authors.qmd Outdated
@@ -42,10 +47,6 @@ This document provides a comprehensive documentation to accompany the authors du
- Use `renv` (R), `conda`/`requirements.txt` (Python), or `Project.toml` (Julia).

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For Python, we can also use environment.yml and micromamba (this is what is done for most published Python repo).

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updated in 1b965c7

@pneuvial pneuvial self-assigned this Jul 7, 2026
@pneuvial
pneuvial merged commit 49ea95c into master Jul 7, 2026
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fradav pushed a commit to computorg/computorg-new.github.io that referenced this pull request Jul 26, 2026
* updates for computorg#69: remove earlier links to templates and rename to main.qmd

* Address most of computorg#69

* rm section "Accessing source code" (the recommended way to access the source code is documented in the FAQ)

* update section on python dependency management
fradav added a commit that referenced this pull request Jul 26, 2026
* - Refactoring of repositories parsing metadata to use `quarto inspect` logic instead of manual metadata extraction/parsing.
- Removed a small redundant subsection tittle in the authors guide.
- RSS feed generated by the main publication script (as quarto is not capable of generating RSS feeds directly from an existing yml).

* Update build workflow to stage both YAML and XML published files

* Update publications from getcomputo-pub.fsx [skip ci]

* 2026 may update

* forgot dotnet tool

* Fix workflow indentation and build command

Steps are now properly nested under the jobs definition. Remove
the UpdatePublications target argument from the refresh step.
Track .config/dotnet-tools.json by updating gitignore.

* Revert

* Refresh publication metadata [skip ci]

* Update dependency chain in Build.fs

Remove UpdatePublications target from default chain

* Update lab affiliation for Fradav

* Borked link to pci

* Fix article pages missing from sitemap causing indexing issues

Google Search Console diagnostics showed that published article pages
(hosted from separate computorg/published-* repos, served as subpaths
of computo-journal.org) were mostly stuck in "Crawled - currently not
indexed", while the site's sitemap.xml only listed the 17 core pages
and never referenced any of the 21 published articles.

- Normalize article URLs to https in PublicationUpdater.fs and in the
  already-committed site/published.yml (13 entries were http://,
  producing duplicate-content signals since those repos didn't
  enforce HTTPS)
- Generate a sitemap fragment (site/published-sitemap-fragment.xml)
  listing all published article URLs whenever publications are
  refreshed
- Merge that fragment into _site/sitemap.xml after quarto render in
  Build.fs, so the deployed sitemap now includes article pages
  alongside the core site pages

Also enabled "Enforce HTTPS" on the 14 computorg/published-* repos
where it was disabled, via the GitHub API (separate from this repo,
not part of this commit).

* Remove old publication updater and update CI checkout

Remove all F# source files, tests, and Paket dependency management for
the
publication updater. Update the CI workflow to use actions/checkout@v4
and
clarify the checkout step name.

* fix: configure NuGet source with credentials before installing dotnet tool

* fix: remove duplicate NuGet source addition, use already-configured source

* fix: use API_GITHUB_TOKEN for NuGet source authentication

* fix: use API_GITHUB_TOKEN for NuGet source auth in install step

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Add TODO.md and workflow dispatch force option for build.yml

* Reviewer names (#73)

* update paragraph on reviewers' anonymity #70

* add reviewer names

* Guidelines authors (#71)

* updates for #69: remove earlier links to templates and rename to main.qmd

* Address most of #69

* rm section "Accessing source code" (the recommended way to access the source code is documented in the FAQ)

* update section on python dependency management

* fix formatting of reviewer names

* more work on alphabetic order

* feat: add Open Graph and social metadata (#72)

Enable `open-graph` and `twitter-card` in Quarto and add a branded
1200x630 social card so links render with an image on social media.
Replace the homepage's HTML `description` (metadata-only on this page)
with a plain sentence so the meta description no longer repeats the
title.

Also improve indexing: set `canonical-url`, drop the trailing slash
from `site-url` for clean absolute URLs, and add a post-render hook to
align sitemap entries with the canonical trailing-slash form.

Fixes #65

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Cleaning

* Removed unused xml

* Removed TODO.md

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Julien Chiquet <julien.chiquet@inrae.fr>
Co-authored-by: Pierre Neuvial <pneuvial@users.noreply.github.com>
Co-authored-by: Pierre Neuvial <pierre.neuvial@math.cnrs.fr>
Co-authored-by: Johan Larsson <13087841+jolars@users.noreply.github.com>
fradav added a commit that referenced this pull request Jul 26, 2026
* - Refactoring of repositories parsing metadata to use `quarto inspect` logic instead of manual metadata extraction/parsing.
- Removed a small redundant subsection tittle in the authors guide.
- RSS feed generated by the main publication script (as quarto is not capable of generating RSS feeds directly from an existing yml).

* Update build workflow to stage both YAML and XML published files

* Update publications from getcomputo-pub.fsx [skip ci]

* 2026 may update

* forgot dotnet tool

* Fix workflow indentation and build command

Steps are now properly nested under the jobs definition. Remove
the UpdatePublications target argument from the refresh step.
Track .config/dotnet-tools.json by updating gitignore.

* Revert

* Refresh publication metadata [skip ci]

* Update dependency chain in Build.fs

Remove UpdatePublications target from default chain

* Update lab affiliation for Fradav

* Borked link to pci

* Fix article pages missing from sitemap causing indexing issues

Google Search Console diagnostics showed that published article pages
(hosted from separate computorg/published-* repos, served as subpaths
of computo-journal.org) were mostly stuck in "Crawled - currently not
indexed", while the site's sitemap.xml only listed the 17 core pages
and never referenced any of the 21 published articles.

- Normalize article URLs to https in PublicationUpdater.fs and in the
  already-committed site/published.yml (13 entries were http://,
  producing duplicate-content signals since those repos didn't
  enforce HTTPS)
- Generate a sitemap fragment (site/published-sitemap-fragment.xml)
  listing all published article URLs whenever publications are
  refreshed
- Merge that fragment into _site/sitemap.xml after quarto render in
  Build.fs, so the deployed sitemap now includes article pages
  alongside the core site pages

Also enabled "Enforce HTTPS" on the 14 computorg/published-* repos
where it was disabled, via the GitHub API (separate from this repo,
not part of this commit).

* Remove old publication updater and update CI checkout

Remove all F# source files, tests, and Paket dependency management for
the
publication updater. Update the CI workflow to use actions/checkout@v4
and
clarify the checkout step name.

* fix: configure NuGet source with credentials before installing dotnet tool

* fix: remove duplicate NuGet source addition, use already-configured source

* fix: use API_GITHUB_TOKEN for NuGet source authentication

* fix: use API_GITHUB_TOKEN for NuGet source auth in install step

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Add TODO.md and workflow dispatch force option for build.yml

* Reviewer names (#73)

* update paragraph on reviewers' anonymity #70

* add reviewer names

* Guidelines authors (#71)

* updates for #69: remove earlier links to templates and rename to main.qmd

* Address most of #69

* rm section "Accessing source code" (the recommended way to access the source code is documented in the FAQ)

* update section on python dependency management

* fix formatting of reviewer names

* more work on alphabetic order

* feat: add Open Graph and social metadata (#72)

Enable `open-graph` and `twitter-card` in Quarto and add a branded
1200x630 social card so links render with an image on social media.
Replace the homepage's HTML `description` (metadata-only on this page)
with a plain sentence so the meta description no longer repeats the
title.

Also improve indexing: set `canonical-url`, drop the trailing slash
from `site-url` for clean absolute URLs, and add a post-render hook to
align sitemap entries with the canonical trailing-slash form.

Fixes #65

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Refresh publication metadata [skip ci]

* Cleaning

* Removed unused xml

* Removed TODO.md

* Restore FAQ entry and lua script (without documentation note)

- blog/2026-07-26-google-scholar/index.qmd: FAQ entry for Google Scholar
- scripts/fix-sitemap.lua: Lua replacement for bash sitemap script
- _quarto.yml: Updated to include FAQ in navigation
- .gitignore: Updated ignores
- Removed scripts/fix-sitemap.sh (replaced by lua)

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: Julien Chiquet <julien.chiquet@inrae.fr>
Co-authored-by: Pierre Neuvial <pneuvial@users.noreply.github.com>
Co-authored-by: Pierre Neuvial <pierre.neuvial@math.cnrs.fr>
Co-authored-by: Johan Larsson <13087841+jolars@users.noreply.github.com>
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