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3 changes: 2 additions & 1 deletion rocrate/rocrate.py
Original file line number Diff line number Diff line change
Expand Up @@ -693,10 +693,11 @@ def add_workflow(
))
if isinstance(lang, ComputerLanguage):
assert lang.crate is self
assert self.get(lang.id) is lang
else:
lang = get_lang(self, lang, version=lang_version)
self.add(lang)
lang_str = lang.id.rsplit("#", 1)[1]
lang_str = lang.id.rsplit("#", 1)[-1]
workflow.lang = lang
if main:
self.mainEntity = workflow
Expand Down
21 changes: 21 additions & 0 deletions test/test_workflow_ro_crate.py
Original file line number Diff line number Diff line change
Expand Up @@ -24,6 +24,7 @@

import pytest

from rocrate.model import ComputerLanguage
from rocrate.rocrate import ROCrate, make_workflow_rocrate
try:
import galaxy2cwl # noqa: F401
Expand Down Expand Up @@ -158,3 +159,23 @@ def test_cwl_lang_version(test_data_dir, lang_version):
else:
assert lang_id == "https://w3id.org/cwl/v1.2/"
assert lang["version"] == "v1.2"


def test_custom_lang(tmpdir):
wf_id = 'custom_wf.foo'
wf_path = tmpdir / wf_id
wf_path.write_text("Step1: foo\nStep2: bar\n")
crate = ROCrate()
lang_id = "https://example.org/lang/foo"
lang = ComputerLanguage(
crate,
identifier=lang_id,
properties={
"name": "Foo language",
"identifier": {"@id": lang_id},
"url": {"@id": lang_id}
},
)
crate.add(lang)
workflow = crate.add_workflow(wf_path, wf_id, lang=lang)
assert workflow["programmingLanguage"].id == lang_id
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