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Update NEE and LE gap-fill functions #3883

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Update NEE and LE gap-fill functions #3883

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77f3c93
Upload NEE and LE gap-fill functions
Mar 19, 2026
6198171
make roxygen files fot gap-filling scripts
Mar 19, 2026
2dce279
commit rosxygen files for read_site_ids
Mar 19, 2026
dd53678
update description
Mar 19, 2026
7c5a76b
update Rd
Mar 19, 2026
5e0c31e
Fix NSE notes in xgb_gapfill
Mar 19, 2026
42d8f0c
put packages into Suggests
Mar 20, 2026
ae1390a
Merge branch 'develop' into develop
Amedieus Apr 8, 2026
c660cfd
Merge branch 'PecanProject:develop' into develop
Amedieus Apr 11, 2026
ad314c5
Merge branch 'develop' into develop
Amedieus Apr 16, 2026
b6bdea5
data prep for downscaling and bcm code
Apr 17, 2026
3de4e1e
Merge branch 'develop' of https://github.com/Amedieus/PEcAn into develop
Apr 17, 2026
ea206ad
Merge branch 'PecanProject:develop' into develop
Amedieus Apr 17, 2026
a8b9dc9
Update modules/data.land/R/SIPNET_flux_gapfill.R
Amedieus Apr 17, 2026
706252a
upload the revised version to repo
Apr 28, 2026
5367eb8
multi chain MCMC config & fix NEE unit
Apr 30, 2026
14b4ff4
update bf byproduct
May 12, 2026
8e2c97d
monthly sipnet available
May 12, 2026
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4 changes: 4 additions & 0 deletions docker/depends/pecan_package_dependencies.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,7 @@
"data.table","*","base/utils","Suggests",FALSE
"data.table","*","base/visualization","Imports",FALSE
"data.table","*","models/biocro","Imports",FALSE
"data.table","*","modules/data.land","Suggests",FALSE
"data.table","*","modules/data.remote","Suggests",FALSE
"dataone","*","modules/data.land","Suggests",FALSE
"datapack","*","modules/data.land","Suggests",FALSE
Expand All @@ -41,6 +42,7 @@
"dbplyr",">= 2.4.0","base/db","Imports",FALSE
"devtools","*","models/ed","Suggests",FALSE
"doParallel","*","modules/data.atmosphere","Suggests",FALSE
"doParallel","*","modules/data.land","Suggests",FALSE
"doParallel","*","modules/data.remote","Imports",FALSE
"doSNOW","*","base/remote","Suggests",FALSE
"doSNOW","*","base/utils","Suggests",FALSE
Expand Down Expand Up @@ -667,6 +669,7 @@
"tibble","*","models/fates","Imports",FALSE
"tibble","*","models/lpjguess","Imports",FALSE
"tibble","*","modules/data.atmosphere","Imports",FALSE
"tibble","*","modules/data.land","Suggests",FALSE
"tibble","*","modules/data.remote","Suggests",FALSE
"tibble","*","modules/meta.analysis","Suggests",FALSE
"tictoc","*","modules/assim.sequential","Suggests",FALSE
Expand Down Expand Up @@ -722,6 +725,7 @@
"withr","*","modules/data.land","Suggests",FALSE
"withr","*","modules/uncertainty","Suggests",FALSE
"xgboost","*","modules/assim.sequential","Suggests",FALSE
"xgboost","*","modules/data.land","Suggests",FALSE
"XML","*","base/workflow","Imports",FALSE
"XML","*","models/biocro","Imports",FALSE
"XML","*","models/maat","Imports",FALSE
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6 changes: 5 additions & 1 deletion modules/data.land/DESCRIPTION
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Expand Up @@ -73,7 +73,11 @@ Suggests:
sp,
testthat (>= 3.1.0),
traits,
withr
withr,
xgboost,
doParallel,
data.table,
tibble
Remotes:
github::ropensci/traits
License: BSD_3_clause + file LICENSE
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1 change: 1 addition & 0 deletions modules/data.land/NAMESPACE
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Expand Up @@ -71,6 +71,7 @@ export(to.TreeCode)
export(validate_events_json)
export(write_ic)
export(write_veg)
export(xgb_gapfill)
importFrom(dplyr,"%>%")
importFrom(foreach,"%dopar%")
importFrom(magrittr,"%>%")
Expand Down
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