[DNM] Add AlchemicalArchive extraction#486
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Awaiting new |
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@ianmkenney would you like me to continue on this one? Otherwise happy to leave it to you! |
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@dotsdl you can take over if you'd like |
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Can do! Thanks for all your work on this! Will ask you for a review once I'm finished! |
Add AlchemiscaleClient.get_network_archive / get_network_archives, which bundle an AlchemicalNetwork with all successful ProtocolDAGResults for its Transformations into a gufe AlchemicalArchive, with optional user-supplied metadata. Not-found networks yield None. Implemented client-side atop the existing get_network and get_transformation_results machinery, replacing the abandoned server-side /bulk/networks/archive endpoint (which referenced undefined names and a non-existent statestore method). Also fixes a missing `json` import in client.py and restores pdr_from_bytes in utils.py (zstd import + decode fallback). Closes #246 Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## main #486 +/- ##
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+ Coverage 80.54% 80.77% +0.23%
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Files 31 31
Lines 4877 4911 +34
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+ Hits 3928 3967 +39
+ Misses 949 944 -5 ☔ View full report in Codecov by Harness. 🚀 New features to boost your workflow:
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closes #246