Skip to content
InSilicoVida-Research-LabPublic

About

Ontology to publish AOP by adopting FAIR principles

Resources

Contributing

Stars

0 stars

Watchers

0 watching

Forks

Repository files navigation

Adverse Outcome Pathway Ontology (AOPO)

OBO-aligned ontology starter migrated from the legacy AOP-KB ontology using the Ontology Development Kit (ODK).

Quick start

# From a path WITHOUT spaces (ODK requirement):
cd aopo/src/ontology
./run.sh make test
./run.sh make all

If your checkout path contains spaces, use Docker directly (see migration-data/MIGRATION.md).

Contents

Path Description
src/ontology/aopo-edit.owl Editor ontology (223 terms from AOP-KB)
src/ontology/aopo-odk.yaml ODK project configuration
src/ontology/imports/ Import modules (RO, IAO, ChEBI, HP)
src/metadata/aopo.yml OBO PURL configuration template

Contributors IISPV: Shubh Sharma, Saurav Kumar, Deepika Deepika, Vikas Kumar MU: Marvin Martens JSI: Pance Panov

License

About

Ontology to publish AOP by adopting FAIR principles

Resources

Contributing

Stars

0 stars

Watchers

0 watching

Forks

Releases

Packages

Contributors

Languages