From 5c35cfe21f63ee151fd333ea11b8115aa42fe7be Mon Sep 17 00:00:00 2001 From: Lukas Heumos Date: Fri, 26 Jun 2026 22:53:01 +0200 Subject: [PATCH] Add scGen batch-removal tutorial to the docs Bump the tutorials submodule to include the restored `scgen_batch_removal.ipynb` and add it to the tools gallery under a new "Batch correction" section. Depends on scverse/pertpy-tutorials#66. Co-Authored-By: Claude Opus 4.8 (1M context) --- docs/tutorials/notebooks | 2 +- docs/tutorials/tools.md | 8 ++++++++ 2 files changed, 9 insertions(+), 1 deletion(-) diff --git a/docs/tutorials/notebooks b/docs/tutorials/notebooks index 42d7ee0f..8fa48e77 160000 --- a/docs/tutorials/notebooks +++ b/docs/tutorials/notebooks @@ -1 +1 @@ -Subproject commit 42d7ee0fb8ede8167d65b577526af895e78a2436 +Subproject commit 8fa48e7735193139183368bd96a5fbc6dfe94ebf diff --git a/docs/tutorials/tools.md b/docs/tutorials/tools.md index 4675562b..92c0b561 100644 --- a/docs/tutorials/tools.md +++ b/docs/tutorials/tools.md @@ -55,6 +55,14 @@ notebooks/scgen_perturbation_prediction ``` +## Batch correction + +```{eval-rst} +.. nbgallery:: + + notebooks/scgen_batch_removal +``` + ## Perturbation space ```{eval-rst}