diff --git a/workflows/epigenetics/consensus-peaks/CHANGELOG.md b/workflows/epigenetics/consensus-peaks/CHANGELOG.md index 74ac021569..9e91e78783 100644 --- a/workflows/epigenetics/consensus-peaks/CHANGELOG.md +++ b/workflows/epigenetics/consensus-peaks/CHANGELOG.md @@ -1,5 +1,10 @@ # Changelog +## [1.7] - 2026-07-20 + +### Automatic update +- `toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1` was updated to `toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2` + ## [1.6] - 2026-06-01 ### Automatic update diff --git a/workflows/epigenetics/consensus-peaks/consensus-peaks-atac-cutandrun.ga b/workflows/epigenetics/consensus-peaks/consensus-peaks-atac-cutandrun.ga index a0729db73a..fc94445429 100644 --- a/workflows/epigenetics/consensus-peaks/consensus-peaks-atac-cutandrun.ga +++ b/workflows/epigenetics/consensus-peaks/consensus-peaks-atac-cutandrun.ga @@ -1228,7 +1228,7 @@ }, "24": { "annotation": "", - "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1", + "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2", "errors": null, "id": 24, "input_connections": { @@ -1270,16 +1270,16 @@ "output_name": "stats" } }, - "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1", + "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2", "tool_shed_repository": { - "changeset_revision": "fac2260bc88a", + "changeset_revision": "0559e0711094", "name": "multiqc", "owner": "iuc", "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"comment\": \"\", \"export\": false, \"flat\": false, \"image_content_input\": {\"__class__\": \"RuntimeValue\"}, \"png_plots\": false, \"results\": [{\"__index__\": 0, \"software_cond\": {\"software\": \"macs2\", \"__current_case__\": 17, \"input\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"software_cond\": {\"software\": \"macs2\", \"__current_case__\": 17, \"input\": {\"__class__\": \"ConnectedValue\"}}}], \"saveLog\": \"false\", \"title\": \"\", \"__page__\": null, \"__rerun_remap_job_id__\": null}", "tool_uuid": null, - "tool_version": "1.35+galaxy1", + "tool_version": "1.35+galaxy2", "type": "tool", "uuid": "f7d74248-16e3-4020-8156-caae0e7682ef", "when": null, @@ -1436,7 +1436,7 @@ "tags": [ "ATAC-seq" ], - "uuid": "d2636dbe-8e14-4d3a-84e7-f92740d8f03c", + "uuid": "9abf948c-d322-45ed-83de-b94410c99af7", "version": 1, - "release": "1.6" + "release": "1.7" } \ No newline at end of file diff --git a/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-pe.ga b/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-pe.ga index 77ee891f2a..6ab655dbb9 100644 --- a/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-pe.ga +++ b/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-pe.ga @@ -1154,7 +1154,7 @@ }, "22": { "annotation": "", - "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1", + "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2", "errors": null, "id": 22, "input_connections": { @@ -1196,16 +1196,16 @@ "output_name": "stats" } }, - "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1", + "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2", "tool_shed_repository": { - "changeset_revision": "fac2260bc88a", + "changeset_revision": "0559e0711094", "name": "multiqc", "owner": "iuc", "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"comment\": \"\", \"export\": false, \"flat\": false, \"image_content_input\": {\"__class__\": \"RuntimeValue\"}, \"png_plots\": false, \"results\": [{\"__index__\": 0, \"software_cond\": {\"software\": \"macs2\", \"__current_case__\": 17, \"input\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"software_cond\": {\"software\": \"macs2\", \"__current_case__\": 17, \"input\": {\"__class__\": \"ConnectedValue\"}}}], \"saveLog\": \"false\", \"title\": \"\", \"__page__\": null, \"__rerun_remap_job_id__\": null}", "tool_uuid": null, - "tool_version": "1.35+galaxy1", + "tool_version": "1.35+galaxy2", "type": "tool", "uuid": "f7d74248-16e3-4020-8156-caae0e7682ef", "when": null, @@ -1362,7 +1362,7 @@ "tags": [ "ATAC-seq" ], - "uuid": "c95f796f-e433-4c76-9327-3b206fca1644", + "uuid": "6058a4ea-78e6-4922-996b-da568935c67f", "version": 1, - "release": "1.6" + "release": "1.7" } \ No newline at end of file diff --git a/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-sr.ga b/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-sr.ga index 717e2d2d7d..5e24cda2c3 100644 --- a/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-sr.ga +++ b/workflows/epigenetics/consensus-peaks/consensus-peaks-chip-sr.ga @@ -1154,7 +1154,7 @@ }, "22": { "annotation": "", - "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1", + "content_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2", "errors": null, "id": 22, "input_connections": { @@ -1196,16 +1196,16 @@ "output_name": "stats" } }, - "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy1", + "tool_id": "toolshed.g2.bx.psu.edu/repos/iuc/multiqc/multiqc/1.35+galaxy2", "tool_shed_repository": { - "changeset_revision": "fac2260bc88a", + "changeset_revision": "0559e0711094", "name": "multiqc", "owner": "iuc", "tool_shed": "toolshed.g2.bx.psu.edu" }, "tool_state": "{\"comment\": \"\", \"export\": false, \"flat\": false, \"image_content_input\": {\"__class__\": \"RuntimeValue\"}, \"png_plots\": false, \"results\": [{\"__index__\": 0, \"software_cond\": {\"software\": \"macs2\", \"__current_case__\": 17, \"input\": {\"__class__\": \"ConnectedValue\"}}}, {\"__index__\": 1, \"software_cond\": {\"software\": \"macs2\", \"__current_case__\": 17, \"input\": {\"__class__\": \"ConnectedValue\"}}}], \"saveLog\": \"false\", \"title\": \"\", \"__page__\": null, \"__rerun_remap_job_id__\": null}", "tool_uuid": null, - "tool_version": "1.35+galaxy1", + "tool_version": "1.35+galaxy2", "type": "tool", "uuid": "f7d74248-16e3-4020-8156-caae0e7682ef", "when": null, @@ -1362,7 +1362,7 @@ "tags": [ "ATAC-seq" ], - "uuid": "a9c3085f-083d-43ec-9425-9d36b322fee5", + "uuid": "0ced776a-a2e7-49b0-8ade-b0b211e1dda9", "version": 1, - "release": "1.6" + "release": "1.7" } \ No newline at end of file