From 95e76b741346698943c63dcc4c1f2be4a9332e00 Mon Sep 17 00:00:00 2001
From: "Jurriaan H. Spaaks" <j.spaaks@esciencecenter.nl>
Date: Thu, 11 Mar 2021 08:35:03 +0100
Subject: [PATCH 1/5] disabled local coverage calculation

---
 setup.cfg | 1 -
 1 file changed, 1 deletion(-)

diff --git a/setup.cfg b/setup.cfg
index 45a946b..1445cbf 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -31,7 +31,6 @@ description-file = README.rst
 
 [tool:pytest]
 testpaths = tests
-addopts = --cov --cov-report xml --cov-report term --cov-report html
 
 [tool:isort]
 lines_after_imports = 2

From 90370e94618228e492611a6b6b805feb29a8f9d0 Mon Sep 17 00:00:00 2001
From: "Jurriaan H. Spaaks" <j.spaaks@esciencecenter.nl>
Date: Thu, 11 Mar 2021 09:35:10 +0100
Subject: [PATCH 2/5] cleaned up where coverage reports are written (xml, html,
 and .coverage)

---
 .coveragerc        | 17 +++++++++++++++++
 coverage/README.md |  1 +
 setup.cfg          |  5 +----
 3 files changed, 19 insertions(+), 4 deletions(-)
 create mode 100644 .coveragerc
 create mode 100644 coverage/README.md

diff --git a/.coveragerc b/.coveragerc
new file mode 100644
index 0000000..98cf22d
--- /dev/null
+++ b/.coveragerc
@@ -0,0 +1,17 @@
+[run]
+data_file = coverage/.coverage
+branch = true
+
+[paths]
+source = fairtally/
+
+[html]
+directory = coverage/htmlcov/
+
+[xml]
+output = coverage/coverage.xml
+
+[report]
+omit =
+    venv*
+    tests/*
diff --git a/coverage/README.md b/coverage/README.md
new file mode 100644
index 0000000..6b16bb9
--- /dev/null
+++ b/coverage/README.md
@@ -0,0 +1 @@
+The coverage reports will be written in this directory.
diff --git a/setup.cfg b/setup.cfg
index 1445cbf..88eba8e 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -22,15 +22,12 @@ build-dir = docs/_build
 all_files = 1
 builder = html
 
-[coverage:run]
-branch = True
-source = fairtally
-
 [metadata]
 description-file = README.rst
 
 [tool:pytest]
 testpaths = tests
+addopts = --cov --cov-config=.coveragerc --cov-report html --cov-report term --cov-report xml
 
 [tool:isort]
 lines_after_imports = 2

From 845282b05b4cbb04a3db4ffe1f7800d9c9bb675c Mon Sep 17 00:00:00 2001
From: "Jurriaan H. Spaaks" <j.spaaks@esciencecenter.nl>
Date: Thu, 11 Mar 2021 09:41:37 +0100
Subject: [PATCH 3/5] linter

---
 coverage/README.md | 32 +++++++++++++++++++++++++++++++-
 1 file changed, 31 insertions(+), 1 deletion(-)

diff --git a/coverage/README.md b/coverage/README.md
index 6b16bb9..68411f7 100644
--- a/coverage/README.md
+++ b/coverage/README.md
@@ -1 +1,31 @@
-The coverage reports will be written in this directory.
+#Coverage reporting
+
+The coverage reports will be written in this directory. After running `pytest`, the directory should look more or less like this:
+
+```text
+coverage/
+├── .coverage
+├── coverage.xml
+├── htmlcov
+│   ├── coverage_html.js
+│   ├── fairtally_check_py.html
+│   ├── fairtally_cli_py.html
+│   ├── fairtally___init___py.html
+│   ├── fairtally_redirect_stdout_stderr_py.html
+│   ├── fairtally_utils_py.html
+│   ├── fairtally___version___py.html
+│   ├── favicon_32.png
+│   ├── index.html
+│   ├── jquery.ba-throttle-debounce.min.js
+│   ├── jquery.hotkeys.js
+│   ├── jquery.isonscreen.js
+│   ├── jquery.min.js
+│   ├── jquery.tablesorter.min.js
+│   ├── keybd_closed.png
+│   ├── keybd_open.png
+│   ├── status.json
+│   └── style.css
+└── README.md
+```
+
+Everything except the README is generated (see configuration in `/.coveragerc`).

From 36295944519ff3eceddddc3205f60e4361997052 Mon Sep 17 00:00:00 2001
From: "Jurriaan H. Spaaks" <j.spaaks@esciencecenter.nl>
Date: Thu, 11 Mar 2021 09:45:53 +0100
Subject: [PATCH 4/5] ehrmergerd linting

---
 coverage/README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/coverage/README.md b/coverage/README.md
index 68411f7..d89e4c3 100644
--- a/coverage/README.md
+++ b/coverage/README.md
@@ -1,4 +1,4 @@
-#Coverage reporting
+# Coverage reporting
 
 The coverage reports will be written in this directory. After running `pytest`, the directory should look more or less like this:
 

From f95bd8caeaca0df6a7991918b01b7b912752449d Mon Sep 17 00:00:00 2001
From: "Jurriaan H. Spaaks" <j.spaaks@esciencecenter.nl>
Date: Tue, 16 Mar 2021 16:14:27 +0100
Subject: [PATCH 5/5] Update .coveragerc

Co-authored-by: Stefan Verhoeven <s.verhoeven@esciencecenter.nl>
---
 .coveragerc | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.coveragerc b/.coveragerc
index 98cf22d..d367cb2 100644
--- a/.coveragerc
+++ b/.coveragerc
@@ -13,5 +13,5 @@ output = coverage/coverage.xml
 
 [report]
 omit =
-    venv*
+    *env*
     tests/*